Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CfiB | Lip2_6 | RMCT_3511 | RMCT_3514 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Alpha/beta hydrolase domain-containing protein. | 0.593 |
| CfiB | PknE_2 | RMCT_3511 | RMCT_3513 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Protein-disulfide isomerase. | 0.692 |
| CfiB | RMCT_3512 | RMCT_3511 | RMCT_3512 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Integral membrane protein. | 0.695 |
| CfiB | RMCT_3515 | RMCT_3511 | RMCT_3515 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Beta-lactamase, precursor. | 0.543 |
| CfiB | RMCT_3516 | RMCT_3511 | RMCT_3516 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Oxidoreductase. | 0.487 |
| CfiB | RsmD | RMCT_3511 | RMCT_3510 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Methyltransferase. | 0.773 |
| CfiB | coaD | RMCT_3511 | RMCT_3509 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.646 |
| Lip2_6 | CfiB | RMCT_3514 | RMCT_3511 | Alpha/beta hydrolase domain-containing protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.593 |
| Lip2_6 | PknE_2 | RMCT_3514 | RMCT_3513 | Alpha/beta hydrolase domain-containing protein. | Protein-disulfide isomerase. | 0.654 |
| Lip2_6 | RMCT_3512 | RMCT_3514 | RMCT_3512 | Alpha/beta hydrolase domain-containing protein. | Integral membrane protein. | 0.677 |
| Lip2_6 | RMCT_3515 | RMCT_3514 | RMCT_3515 | Alpha/beta hydrolase domain-containing protein. | Beta-lactamase, precursor. | 0.773 |
| Lip2_6 | RMCT_3516 | RMCT_3514 | RMCT_3516 | Alpha/beta hydrolase domain-containing protein. | Oxidoreductase. | 0.649 |
| Lip2_6 | ResA_1 | RMCT_3514 | RMCT_2600 | Alpha/beta hydrolase domain-containing protein. | Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen. | 0.401 |
| Lip2_6 | RsmD | RMCT_3514 | RMCT_3510 | Alpha/beta hydrolase domain-containing protein. | Methyltransferase. | 0.439 |
| Lip2_6 | coaD | RMCT_3514 | RMCT_3509 | Alpha/beta hydrolase domain-containing protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.408 |
| PknE_1 | RMCT_3512 | RMCT_2722 | RMCT_3512 | Putative uncharacterized protein. | Integral membrane protein. | 0.610 |
| PknE_1 | ResA_1 | RMCT_2722 | RMCT_2600 | Putative uncharacterized protein. | Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen. | 0.649 |
| PknE_2 | CfiB | RMCT_3513 | RMCT_3511 | Protein-disulfide isomerase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.692 |
| PknE_2 | Lip2_6 | RMCT_3513 | RMCT_3514 | Protein-disulfide isomerase. | Alpha/beta hydrolase domain-containing protein. | 0.654 |
| PknE_2 | RMCT_3512 | RMCT_3513 | RMCT_3512 | Protein-disulfide isomerase. | Integral membrane protein. | 0.933 |
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