Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3564Putative uncharacterized protein. (291 aa)    
Predicted Functional Partners:
RMCT_3565
ATPase.
 
  
 0.951
RMCT_3561
Putative uncharacterized protein.
 
   
 0.946
RMCT_3562
Putative uncharacterized protein.
 
     0.935
RMCT_3560
Autotransporter beta-domain protein.
 
     0.928
RMCT_3566
Putative uncharacterized protein.
 
     0.817
RMCT_2587
ATPase, MoxR family protein.
 
  
 0.791
RMCT_3563
Putative uncharacterized protein.
       0.787
RMCT_2591
Putative uncharacterized protein.
 
   
 0.775
RMCT_2590
Putative uncharacterized protein.
 
     0.749
RMCT_2592
Putative uncharacterized protein.
 
     0.730
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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