Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_3577Ornithine-acyl[acyl carrier protein] N-acyltransferase. (292 aa)    
Predicted Functional Partners:
RMCT_3576
Phospholipid/glycerol acyltransferase.
 
  
 0.980
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.781
IscS
Cysteine desulfurase iscS.
       0.781
FixB
Electron transfer flavoprotein alpha subunit fixB.
       0.623
RMCT_3578
NmrA-like protein.
       0.581
RMCT_3583
Transferase.
 
  
 0.463
EtfB
Electron transfer flavoprotein beta subunit fixA.
       0.448
RMCT_2751
Rhodanese domain-containing protein.
 
     0.426
PspA
Hypothetical protein.
  
     0.400
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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