Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BbsG_1 | CaiD_4 | RMCT_2081 | RMCT_2391 | acyl-CoA dehydrogenase fadE2. | enoyl-CoA hydratase/carnithine racemase. | 0.699 |
BbsG_1 | RMCT_1476 | RMCT_2081 | RMCT_1476 | acyl-CoA dehydrogenase fadE2. | Acyl CoA dehydrogenase. | 0.900 |
BbsG_1 | RMCT_3589 | RMCT_2081 | RMCT_3589 | acyl-CoA dehydrogenase fadE2. | enoyl-CoA hydratase EchA17. | 0.890 |
BbsG_9 | CaiD_4 | RMCT_1025 | RMCT_2391 | acyl-CoA dehydrogenase domain-containing protein. | enoyl-CoA hydratase/carnithine racemase. | 0.699 |
BbsG_9 | RMCT_1476 | RMCT_1025 | RMCT_1476 | acyl-CoA dehydrogenase domain-containing protein. | Acyl CoA dehydrogenase. | 0.904 |
BbsG_9 | RMCT_3589 | RMCT_1025 | RMCT_3589 | acyl-CoA dehydrogenase domain-containing protein. | enoyl-CoA hydratase EchA17. | 0.890 |
CaiD_4 | BbsG_1 | RMCT_2391 | RMCT_2081 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase fadE2. | 0.699 |
CaiD_4 | BbsG_9 | RMCT_2391 | RMCT_1025 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase domain-containing protein. | 0.699 |
CaiD_4 | FadE2_1 | RMCT_2391 | RMCT_0897 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase. | 0.699 |
CaiD_4 | RMCT_0922 | RMCT_2391 | RMCT_0922 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase fadE19. | 0.699 |
CaiD_4 | RMCT_1030 | RMCT_2391 | RMCT_1030 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase. | 0.699 |
CaiD_4 | RMCT_1034 | RMCT_2391 | RMCT_1034 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase. | 0.699 |
CaiD_4 | RMCT_1252 | RMCT_2391 | RMCT_1252 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase domain-containing protein. | 0.699 |
CaiD_4 | RMCT_1476 | RMCT_2391 | RMCT_1476 | enoyl-CoA hydratase/carnithine racemase. | Acyl CoA dehydrogenase. | 0.699 |
CaiD_4 | RMCT_3052 | RMCT_2391 | RMCT_3052 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase. | 0.699 |
CaiD_4 | RMCT_3589 | RMCT_2391 | RMCT_3589 | enoyl-CoA hydratase/carnithine racemase. | enoyl-CoA hydratase EchA17. | 0.923 |
FadE2_1 | CaiD_4 | RMCT_0897 | RMCT_2391 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase/carnithine racemase. | 0.699 |
FadE2_1 | RMCT_1476 | RMCT_0897 | RMCT_1476 | acyl-CoA dehydrogenase. | Acyl CoA dehydrogenase. | 0.900 |
FadE2_1 | RMCT_3589 | RMCT_0897 | RMCT_3589 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase EchA17. | 0.890 |
RMCT_0922 | CaiD_4 | RMCT_0922 | RMCT_2391 | acyl-CoA dehydrogenase fadE19. | enoyl-CoA hydratase/carnithine racemase. | 0.699 |
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