Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_3590NUDIX hydrolase. (272 aa)    
Predicted Functional Partners:
EcfA2
ABC transporter ATP-binding protein.
  
    0.886
PksB
Hydrolase.
     0.870
RMCT_3589
enoyl-CoA hydratase EchA17.
  
    0.778
RebM_2
Type 11 methyltransferase.
     
 0.744
RMCT_3587
SAM-dependent methyltransferase.
     
 0.577
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.548
BedA
NAD(FAD)-dependent dehydrogenase.
   
 0.548
RMCT_3586
Immunogenic protein MPB64/MPT64.
  
   0.519
RMCT_3897
Regulatory protein.
  
     0.482
FixB
Electron transfer flavoprotein alpha subunit fixB.
  
 
 0.470
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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