Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3700Zn-dependent hydrolase. (232 aa)    
Predicted Functional Partners:
RMCT_3699
Putative uncharacterized protein.
       0.783
RMCT_3698
Glycine rich membrane protein.
       0.778
PnbA_5
Carboxylesterase, type B; Belongs to the type-B carboxylesterase/lipase family.
 
   
 0.666
BedA
NAD(FAD)-dependent dehydrogenase.
 
 
 0.612
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.548
RMCT_4651
Putative uncharacterized protein.
 
   
 0.530
RMCT_3701
Hypothetical protein.
       0.529
YgaP
Rhodanese domain-containing protein.
 
 
 0.504
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.458
DprE1_1
FAD linked oxidase domain-containing protein.
     
 0.442
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.