STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3723Indolepyruvate ferredoxin oxidoreductase alpha and subunit beta. (1188 aa)    
Predicted Functional Partners:
RMCT_0837
Oxidoreductase subunit alpha.
  
 
 0.994
RMCT_0836
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 
 0.976
NarB
Sulfite reductase (NADPH) subunit alpha.
  
  
 0.810
FprB
ferredoxin/ferredoxin--NADP reductase.
  
  
 0.782
FprA_1
4Fe-4S ferredoxin.
  
  
 0.782
RMCT_3665
Succinate dehydrogenase/fumarate reductase flavoprotein subunit.
  
 
 0.688
SdhA_3
Succinate dehydrogenase (iron-sulfur subunit) SdhA.
  
 
 0.688
RMCT_3667
Oxidoreductase.
  
 
 0.688
RMCT_3668
Oxidoreductase.
  
 
 0.688
RMCT_3669
Succinate dehydrogenase/fumarate reductase flavoprotein subunit.
  
 
 0.688
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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