Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_3724Fumarylacetoacetate hydrolase family protein. (298 aa)    
Predicted Functional Partners:
RMCT_3725
Putative uncharacterized protein; Belongs to the UPF0312 family.
  
    0.707
TcmG
Putative monooxygenase.
  
  
 0.704
BphC3_2
Putative biphenyl-2,3-diol 1,2-dioxygenase III.
     
 0.687
Kgd
Alpha-ketoglutarate decarboxylase.
  
 
 0.561
RMCT_1828
Homogentisate 1,2-dioxygenase.
  
  
 0.499
RMCT_3045
Homogentisate 1,2-dioxygenase.
  
  
 0.499
RMCT_1698
ATP dependent DNA ligase.
  
  
 0.484
EctB
Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.460
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
 
 
 0.452
RMCT_4385
Glycoside hydrolase family 2 protein.
 
 
 0.452
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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