Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TldDC69 family peptidase. (504 aa)    
Predicted Functional Partners:
RMCT_3772
calR5.
 
     0.968
egtB
TIGR03440 family protein; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.
     
 0.681
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
     
 0.681
CobM
Precorrin-4 c11-methyltransferase cobM; Belongs to the precorrin methyltransferase family.
     
 0.678
LpdA
Flavoprotein disulfide reductase.
   
  
 0.669
Nfo
Endonuclease IV.
      
 0.665
EcfT
Cobalt transport protein.
     
 0.568
RMCT_3769
ATPase component of various ABC-type transport systems with duplicated ATPase domain.
       0.548
RMCT_0180
Transcriptional regulator.
  
     0.507
RMCT_3933
Phosphoglycerate mutase.
     
 0.473
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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