STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3772calR5. (459 aa)    
Predicted Functional Partners:
TldD
C69 family peptidase.
 
     0.972
RMCT_0180
Transcriptional regulator.
  
     0.615
EcfT
Cobalt transport protein.
       0.563
RMCT_3769
ATPase component of various ABC-type transport systems with duplicated ATPase domain.
       0.547
RMCT_1804
Acyl-[acyl-carrier-protein] desaturase desA1.
 
   
 0.496
RMCT_1460
Acyl-[acyl-carrier protein] desaturase desA2.
 
   
 0.495
YusO_1
MarR family transcriptional regulator.
       0.415
RMCT_3768
ATP-dependent dethiobiotin synthetase BioD.
       0.413
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.