Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RMCT_3775Integral membrane protein. (286 aa)    
Predicted Functional Partners:
Mpt53
Soluble secreted antigen mpt53 precursor.
 
  
 0.965
PinR
Resolvase domain protein.
 
    0.545
CcsB
Cytochrome c assembly protein.
  
  
 0.540
ResA_2
Thiol-disulfide isomerase-like thioredoxin.
  
  
 0.532
RMCT_2598
Transmembrane protein.
  
  
 0.518
RMCT_1262
Putative uncharacterized protein.
  
    0.504
ResA_1
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.
  
  
 0.483
RMCT_3773
Putative uncharacterized protein.
       0.479
CysG_1
uroporphyrin-III C-methyltransferase hemD.
  
    0.476
RMCT_3777
Hypothetical protein.
  
    0.460
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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