STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3782Probable dehydrogenase. (61 aa)    
Predicted Functional Partners:
RMCT_3540
Alanine rich dehydrogenase.
  
     0.767
RMCT_3783
Uncharacterized protein.
       0.757
CrtM
Phytoene synthase.
  
  
 0.618
RMCT_1161
Transmembrane protein of unknown function.
 
     0.617
RMCT_3787
Putative uncharacterized protein.
 
     0.584
RMCT_3784
Uncharacterized protein.
       0.562
RMCT_1163
Putative uncharacterized protein.
 
     0.555
BcrC
Sphingosine/diacylglycerol kinase-like enzyme.
 
    0.508
BchI_1
Magnesium chelatase.
  
  
 0.503
CobN
Cobalamin biosynthesis protein cobN.
  
  
 0.473
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.