STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DdpCDipeptide/oligopeptide/nickel ABC transporter permease. (313 aa)    
Predicted Functional Partners:
GsiA_1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
  
 0.997
MetN2
ABC transporter-like protein.
  
 0.992
GsiC_2
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
 0.985
DppA
Extracellular solute-binding protein.
 
 0.976
GsiA_3
Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily.
  
 0.962
GsiC_3
Oligopeptide-transport integral membrane protein ABC transporter oppB.
  
 0.944
GsiC_1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.
  
 0.922
AppA
Peptide ABC transporter periplasmic protein.
 
 
 0.869
RMCT_1381
Periplasmic oligopeptide-binding lipoprotein oppA.
 
 
 0.760
GsiA_2
ABC transporter--like protein.
 
     0.735
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.