Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
RMCT_3798Putative uncharacterized protein. (186 aa)    
Predicted Functional Partners:
DdpC
Dipeptide/oligopeptide/nickel ABC transporter permease.
       0.593
GsiC_2
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
       0.593
DppA
Extracellular solute-binding protein.
       0.592
GsiA_1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
     
 0.591
RMCT_4299
Membrane protein.
      
 0.536
KatA
Catalase.
   
  
 0.467
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.467
RMCT_2054
MCE associated membrane protein.
      
 0.464
RMCT_0834
Transglycosylase.
  
  
 0.461
RMCT_1776
Resuscitation-promoting factor RpfC.
  
  
 0.456
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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