STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3818Transcriptional regulator, CdaR. (428 aa)    
Predicted Functional Partners:
FabD
Malonyl CoA-acyl carrier protein transacylase fabD.
 
   
 0.889
RMCT_2954
(3R)-hydroxyacyl-ACP dehydratase subunit HadC; Belongs to the UPF0336 family.
 
     0.700
RMCT_2956
(3R)-hydroxyacyl-ACP dehydratase subunit HadA; Belongs to the UPF0336 family.
 
     0.699
AceE_2
Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.686
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
   
 0.654
RMCT_2202
Integral membrane protein.
  
     0.614
RMCT_2623
Acyl dehydratase; Belongs to the UPF0336 family.
 
     0.614
RMCT_2955
(3R)-hydroxyacyl-ACP dehydratase subunit HadB.
 
     0.607
RMCT_3820
Putative uncharacterized protein.
       0.527
RMCT_3821
Protein of unknown function.
 
     0.518
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.