Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PtpA_1Phosphotyrosine protein phosphatase ptpA; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (158 aa)    
Predicted Functional Partners:
RMCT_3827
HAD family hydrolase.
     
 0.881
RMCT_2049
Fructosamine-3-kinase.
     0.840
RMCT_3825
Transmembrane protein.
       0.801
BaeB_3
Beta-lactamase domain-containing protein.
  
 
 0.760
RMCT_4559
Stage II sporulation protein E.
  
  
 0.675
RMCT_3829
Zn-ribbon protein, possibly nucleic acid-binding protein.
  
    0.669
RMCT_3830
Bifunctional RNase H/acid phosphatase.
     
 0.666
RMCT_3828
Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
     
 0.664
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
  
 0.631
Pks2
Polyketide synthase pks5.
  
 
 0.537
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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