STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3832Hypothetical protein. (512 aa)    
Predicted Functional Partners:
RMCT_0085
Putative uncharacterized protein.
 
  
 0.531
RMCT_0084
Putative uncharacterized protein.
 
  
 0.524
RMCT_1204
UDP-glucuronosyltransferase.
 
     0.523
RMCT_2008
Putative uncharacterized protein.
 
     0.522
RMCT_4597
Glycosyl transferase, UDP-glucuronosyltransferase.
 
     0.516
CaiD_6
enoyl-CoA hydratase/isomerase.
       0.508
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.508
RMCT_0086
Putative uncharacterized protein.
  
     0.505
PcrA_1
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
    0.503
RMCT_3833
long-chain-fatty-acid--AMP ligase FadD32.
       0.501
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.