Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GlnA_2 | RMCT_3843 | RMCT_3845 | RMCT_3843 | Glutamine synthetase glnA1. | DoxX family protein. | 0.456 |
| GlnA_2 | RMCT_3846 | RMCT_3845 | RMCT_3846 | Glutamine synthetase glnA1. | RDD domain-containing protein. | 0.768 |
| GlnA_2 | RMCT_4559 | RMCT_3845 | RMCT_4559 | Glutamine synthetase glnA1. | Stage II sporulation protein E. | 0.492 |
| GlnA_2 | dtd | RMCT_3845 | RMCT_3844 | Glutamine synthetase glnA1. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.614 |
| RMCT_2027 | dtd | RMCT_2027 | RMCT_3844 | Uncharacterized protein, MTH1187 family. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.508 |
| RMCT_3554 | RMCT_4559 | RMCT_3554 | RMCT_4559 | Amino acid-binding ACT domain-containing protein. | Stage II sporulation protein E. | 0.405 |
| RMCT_3554 | dtd | RMCT_3554 | RMCT_3844 | Amino acid-binding ACT domain-containing protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.443 |
| RMCT_3554 | rplD | RMCT_3554 | RMCT_0440 | Amino acid-binding ACT domain-containing protein. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.749 |
| RMCT_3842 | RMCT_3843 | RMCT_3842 | RMCT_3843 | acyl-CoA dehydrogenase. | DoxX family protein. | 0.582 |
| RMCT_3842 | dtd | RMCT_3842 | RMCT_3844 | acyl-CoA dehydrogenase. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.424 |
| RMCT_3843 | GlnA_2 | RMCT_3843 | RMCT_3845 | DoxX family protein. | Glutamine synthetase glnA1. | 0.456 |
| RMCT_3843 | RMCT_3842 | RMCT_3843 | RMCT_3842 | DoxX family protein. | acyl-CoA dehydrogenase. | 0.582 |
| RMCT_3843 | dtd | RMCT_3843 | RMCT_3844 | DoxX family protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.535 |
| RMCT_3846 | GlnA_2 | RMCT_3846 | RMCT_3845 | RDD domain-containing protein. | Glutamine synthetase glnA1. | 0.768 |
| RMCT_3846 | dtd | RMCT_3846 | RMCT_3844 | RDD domain-containing protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.442 |
| RMCT_4559 | GlnA_2 | RMCT_4559 | RMCT_3845 | Stage II sporulation protein E. | Glutamine synthetase glnA1. | 0.492 |
| RMCT_4559 | RMCT_3554 | RMCT_4559 | RMCT_3554 | Stage II sporulation protein E. | Amino acid-binding ACT domain-containing protein. | 0.405 |
| RMCT_4559 | RelA_1 | RMCT_4559 | RMCT_2967 | Stage II sporulation protein E. | Metal dependent phosphohydrolase. | 0.424 |
| RMCT_4559 | RelA_2 | RMCT_4559 | RMCT_3728 | Stage II sporulation protein E. | GTP pyrophosphokinase relA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.424 |
| RMCT_4559 | dtd | RMCT_4559 | RMCT_3844 | Stage II sporulation protein E. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.407 |
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