Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ArsA_1Arsenite-transporting ATPase. (392 aa)    
Predicted Functional Partners:
RMCT_3890
Putative uncharacterized protein.
 
    0.940
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 
 0.773
RMCT_3888
Cyclase/dehydrase.
  
    0.671
PlsC_1
1-acylglycerol-3-phosphate O-acyltransferase.
  
  
 0.654
RMCT_3887
Polyketide cyclase/dehydrase and lipid transport.
 
     0.601
EspK_1
Putative uncharacterized protein.
    
 0.564
RMCT_1082
Uncharacterized protein.
    
 0.564
RMCT_1938
Sulfotransferase family protein.
    
 0.564
EspK_3
Putative uncharacterized protein.
    
 0.564
RMCT_2108
TPR repeat-containing protein.
    
 0.564
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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