Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_3894Gp101; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (171 aa)    
Predicted Functional Partners:
RMCT_3893
Integral membrane protein.
       0.868
AroG_2
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase aroG; Belongs to the class-II DAHP synthase family.
     
 0.831
RMCT_0741
35 kDa alanine rich protein.
  
     0.773
RMCT_1677
Chorismate mutase.
  
     0.773
RMCT_2203
Lipoprotein lprD.
  
     0.749
RMCT_0899
Protein of unknown function.
  
     0.747
RMCT_0579
Hypothetical protein.
  
     0.746
RMCT_2848
DivIVA domain-containing protein.
  
     0.739
RMCT_3901
Acetyltransferase.
  
     0.731
RMCT_3430
Hypothetical protein.
  
     0.727
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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