STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3922NAD-dependent nucleoside-diphosphate sugar epimerase. (449 aa)    
Predicted Functional Partners:
RMCT_0208
Tryptophan-rich sensory protein.
  
  
 0.738
RMCT_3921
Putative uncharacterized protein.
       0.705
DivIVA
DivIVA domain protein.
     
 0.622
RMCT_1834
NAD-dependent epimerase/dehydratase.
 
    0.530
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.527
Alx_1
TerC family integral membrane protein.
       0.518
RMCT_3583
Transferase.
       0.508
RMCT_1064
Acetyltransferase.
  
    0.493
RMCT_3581
Type 11 methyltransferase.
  
  
 0.484
RMCT_1411
3-demethylubiquinone-9 3-methyltransferase.
  
    0.475
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.