STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3946Integral membrane protein. (160 aa)    
Predicted Functional Partners:
MerA
Mercuric reductase.
 
     0.930
XylE
MFS transporter, sugar porter family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.703
RMCT_3586
Immunogenic protein MPB64/MPT64.
  
     0.685
hisE
phosphoribosyl-ATP pyrophosphatase.
       0.619
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
       0.619
RMCT_4047
Putative uncharacterized protein.
  
     0.613
RMCT_0929
Mycobacterium membrane protein.
  
     0.581
RMCT_2644
Putative uncharacterized protein.
  
     0.571
RMCT_0740
Alanine rich transmembrane protein.
  
     0.556
RMCT_0063
Hypothetical protein.
  
     0.538
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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