STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3951Putative uncharacterized protein. (268 aa)    
Predicted Functional Partners:
RMCT_3952
Recombinase B.
       0.799
RMCT_0921
Oxidase regulatory-like protein.
 
 
 0.690
BbsG_11
acyl-CoA dehydrogenase.
 
 
 0.627
BigR_2
ArsR family transcriptional regulator.
 
     0.616
RMCT_0109
Membrane-associated serine protease.
  
 
 0.610
RMCT_3228
Putative uncharacterized protein.
 
 
 0.584
WrbA
Multimeric flavodoxin WrbA.
  
    0.580
TrmI
tRNA (adenine-N(1)-)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.578
KatA
Catalase.
  
 0.570
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.570
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.