Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EthA_1Flavin-binding monooxygenase. (457 aa)    
Predicted Functional Partners:
RMCT_3967
Putative uncharacterized protein.
 
     0.667
EphA
Epoxide hydrolase ephA.
 
 
 0.653
FlhA_2
Oxidoreductase, Rxyl_3153 family.
  
  
 0.581
DesA3
linoleoyl-CoA desaturase.
     
 0.497
RMCT_1947
Dehydrogenase.
  
  
 0.485
RMCT_0603
Dehydrogenase.
  
  
 0.480
CzcD
Cation diffusion facilitator family transporter.
  
  
 0.465
RMCT_1695
Putative uncharacterized protein.
 
 
 
 0.445
DhlA
Epoxide hydrolase ephC.
 
 
 0.427
Ddc
Pyridoxal-dependent decarboxylase.
  
 
 0.415
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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