STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CbdADioxygenase large subunit. (416 aa)    
Predicted Functional Partners:
AntB
Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase.
 
 
 0.979
RMCT_3980
Putative uncharacterized protein.
 
    0.902
EchA8_3
enoyl-CoA hydratase.
 
    0.876
BdhA_1
Bacilysin biosynthesis oxidoreductase bacC.
 
   
 0.850
EchA8_2
enoyl-CoA hydratase/isomerase.
 
    0.833
FabG_2
3-ketoacyl-ACP reductase.
 
   
 0.826
EchA8_4
3-hydroxybutyryl-CoA dehydratase.
 
    0.823
RMCT_3970
Phytoene dehydrogenase family protein.
 
   
 0.793
AndAd
Aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.771
RMCT_3979
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.766
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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