Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3992Glycoside hydrolase, family 76. (391 aa)    
Predicted Functional Partners:
RMCT_2765
VWA containing CoxE-like protein.
     
 0.799
AcsA_1
acetoacetyl-CoA synthetase.
       0.798
RMCT_3155
Integral membrane protein.
  
     0.691
RMCT_1763
Transmembrane protein.
  
     0.658
RMCT_3898
Integral membrane protein.
  
     0.640
RMCT_0576
Putative uncharacterized protein.
  
     0.541
RMCT_3996
Virulence factor Mce family protein.
       0.519
RMCT_3993
Virulence factor Mce family protein.
       0.516
PimE
Mannosyltransferase.
  
     0.515
RMCT_0371
Von Willebrand factor, type A.
  
     0.504
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.