STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4036Iron-sulfur-binding reductase. (991 aa)    
Predicted Functional Partners:
EtfB
Electron transfer flavoprotein beta subunit fixA.
 
  
 0.576
AspC_1
Aminotransferase AlaT.
  
  
 0.569
FixB
Electron transfer flavoprotein alpha subunit fixB.
 
  
 0.528
SdhB
Succinate dehydrogenase iron-sulfur subunit.
   
 
 0.526
FrdB
Fumarate reductase iron-sulfur subunit.
   
 
 0.526
RMCT_0361
Peptidase M48, Ste24p.
     
 0.518
GerE
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.498
RMCT_1983
Glycolate oxidase FAD-linked subunit.
 
  
 0.480
GlpD_1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.477
GlpD_2
Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.477
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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