Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4057Conserved exported protein of unknown function. (213 aa)    
Predicted Functional Partners:
RMCT_3117
ATP synthase I chain.
  
     0.694
BcrC
Sphingosine/diacylglycerol kinase-like enzyme.
 
     0.621
RMCT_2034
Protein of unknown function.
  
     0.555
RMCT_2033
Hypothetical protein.
  
     0.518
RMCT_2988
Protein of unknown function.
 
     0.435
atpB
F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
 
     0.414
SipT
Signal peptidase I lepB; Belongs to the peptidase S26 family.
  
    0.414
MmpL4b
Membrane protein mmpL4.
  
     0.412
MmpL8_4
Transmembrane transport protein MmpL.
  
     0.407
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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