Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_4063Membrane-anchored mycosin mycP3. (466 aa)    
Predicted Functional Partners:
Snm
Transmembrane protein.
 
  
 0.984
RMCT_4062
Putative uncharacterized protein.
  
  
 0.979
EspG1_2
DNA-binding protein.
  
  
 0.966
EccB1_2
Type VII secretion protein EccB, Actinobacterial.
 
 
 0.891
EsxR
EsaT-6 like protein EsxH; Belongs to the WXG100 family.
  
  
 0.888
EccCa1_2
Cell division protein FtsK.
 
 
 0.887
RMCT_4067
PE family protein.
  
  
 0.851
EccB1_3
Putative uncharacterized protein.
 
 
 0.773
EccA1_2
ATPase central domain-containing protein.
 
  
 0.771
EccCa1_3
Cell division FtsK/SpoIIIE.
 
 
 0.756
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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