Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EccB1_2Type VII secretion protein EccB, Actinobacterial. (522 aa)    
Predicted Functional Partners:
EccCa1_2
Cell division protein FtsK.
 
 
 0.965
Snm
Transmembrane protein.
 
 
 0.910
RMCT_4063
Membrane-anchored mycosin mycP3.
 
 
 0.891
EccA1_2
ATPase central domain-containing protein.
 
  
 0.865
RMCT_0537
Putative uncharacterized protein.
 
 
 0.822
RMCT_4068
PPE family protein.
     
 0.788
RMCT_4069
PE family protein.
     
 0.786
EccCa1_3
Cell division FtsK/SpoIIIE.
 
 
 0.764
RMCT_4667
Cutinase.
 
 
 0.757
RMCT_3585
Pyrrolo-quinoline quinone.
 
   
 0.745
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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