STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4075TetR family transcriptional regulator. (215 aa)    
Predicted Functional Partners:
RMCT_4074
Hypothetical protein.
 
     0.698
RMCT_4491
Hypothetical protein.
 
   
 0.593
RMCT_1799
Hypothetical protein.
 
   
 0.551
Tgs2_3
Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
 
     0.475
PsrA
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.472
RMCT_2088
Hypothetical protein.
 
    0.467
RMCT_1150
Protein of unknown function.
  
   
 0.453
FabG_27
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.439
PcrA_1
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
     0.438
FdhF
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.432
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.