STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FadE6acyl-CoA dehydrogenase fadE6. (734 aa)    
Predicted Functional Partners:
RMCT_1949
MaoC-like dehydratase.
 
 0.784
CaiD_11
enoyl-CoA hydratase.
 
 0.782
RMCT_2370
Acyl dehydratase.
 
 0.754
CaiD_10
enoyl-CoA hydratase.
 
 0.746
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.745
RMCT_1959
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.722
EchA8_24
enoyl-CoA hydratase echA9.
  
 0.703
EchA8_30
enoyl-CoA hydratase.
  
 0.702
CaiD_2
enoyl-CoA hydratase/carnithine racemase.
  
 0.701
CaiD_3
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.700
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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