STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4105TetR family transcriptional regulator. (192 aa)    
Predicted Functional Partners:
QacA
Major facilitator transporter.
 
     0.865
RMCT_4107
Putative uncharacterized protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.523
AzoB
dTDP-glucose-46-dehydratase.
 
     0.516
RMCT_3850
TIGR01777 family protein.
 
    0.503
TetC
TetR family transcriptional regulator.
  
    0.464
RMCT_3922
NAD-dependent nucleoside-diphosphate sugar epimerase.
  
    0.434
Rng
Ribonuclease E.
  
    0.423
Aac
Aminoglycoside 2-N-acetyltransferase aac.
       0.419
SipT
Signal peptidase I lepB; Belongs to the peptidase S26 family.
   
    0.408
PhoY2_1
Phosphate-transport system transcriptional regulatory protein phoY2; Plays a role in the regulation of phosphate uptake.
  
    0.407
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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