STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PnbA_1Esterase lipO. (411 aa)    
Predicted Functional Partners:
RMCT_4159
Phospholipid/glycerol acyltransferase.
  
  
 0.837
PpsA_2
Beta-ketoacyl synthase.
  
 
 0.718
FadD_15
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.642
FadK_1
acyl-CoA synthetase.
  
 
 0.642
RMCT_3852
Putative uncharacterized protein.
   
 0.639
EchA1_1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.617
nat
Arylamine N-acetyltransferase.
     
 0.570
Pks2
Polyketide synthase pks5.
  
 
 0.568
RMCT_4156
AraC family transcriptional regulator.
  
    0.566
FadD_3
fatty-acid--CoA ligase FadD8.
  
 
 0.564
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.