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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YrdAIsoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase. (177 aa)    
Predicted Functional Partners:
RMCT_3332
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
   
 
 0.923
RMCT_1374
Carbonic anhydrase.
   
 
 0.752
RMCT_4179
Membrane protein.
       0.653
RMCT_4180
NAD-dependent epimerase/dehydratase.
       0.653
RMCT_4182
beta-Ig-H3/fasciclin.
     
 0.590
KshA_8
Rieske (2Fe-2S) domain-containing protein.
       0.508
RMCT_1936
Hypothetical protein.
       0.508
YjiA
GTPase, G3E family.
  
  
 0.490
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
  
 0.488
WecA
Undecapaprenyl-phosphate alpha-N-acetylglucosaminyltransferaserfe.
  
  
 0.466
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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