STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4197Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. (62 aa)    
Predicted Functional Partners:
KasA_2
Fatty acid synthase.
  
 0.782
RMCT_2498
acyl-CoA dehydrogenase domain-containing protein.
 
  0.751
RMCT_4533
Putative uncharacterized protein.
 
  0.715
RMCT_2499
acyl-CoA dehydrogenase domain-containing protein.
 
  0.698
RMCT_1034
acyl-CoA dehydrogenase.
 
  0.681
RMCT_2167
acyl-CoA dehydrogenase domain-containing protein.
 
  0.681
RMCT_4609
acyl-CoA dehydrogenase domain-containing protein.
 
  0.672
RMCT_2168
acyl-CoA dehydrogenase.
 
  0.668
RMCT_4608
acyl-CoA dehydrogenase.
 
  0.654
RMCT_3370
Acyl dehydratase.
 
 0.640
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.