Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Frc_7L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (411 aa)    
Predicted Functional Partners:
Frc_8
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
     0.770
Frc_18
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
     0.768
Frc_1
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
  
     0.755
BaiF_1
Putative acyl-CoA transferase; Belongs to the CoA-transferase III family.
  
     0.736
RMCT_3385
acyl-CoA dehydrogenase.
  
 
 0.618
RMCT_3382
acyl-CoA dehydrogenase.
  
 
 0.612
RMCT_4222
UspA domain-containing protein.
       0.543
McbR_2
GntR family transcriptional regulator.
 
   
 0.536
RMCT_4686
Putative uncharacterized protein.
 
 
 0.525
RMCT_2002
Putative uncharacterized protein.
 
 
 0.524
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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