Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_4248Gluconolactonase. (276 aa)    
Predicted Functional Partners:
RMCT_4247
Putative uncharacterized protein.
 
     0.830
IdnD
Theronine dehydrogenase-like Zn-dependent dehydrogenase.
 
  
 0.752
HpcH
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.721
RMCT_1624
Gluconolactonase.
  
     0.648
RMCT_4250
Cytochrome P450.
 
    0.634
Lip2_7
Alpha/beta hydrolase domain-containing protein.
  
  
 0.594
RMCT_4249
Cytochrome P450 130.
       0.577
CpnA_1
Short-chain dehydrogenase/reductase SDR.
  
  
 0.574
HapE_6
Cyclohexanone monooxygenase.
  
    0.564
RutB
Nicotinamidase-like amidase.
 
    0.563
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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