Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4258Protein of unknown function. (84 aa)    
Predicted Functional Partners:
RMCT_3336
LpqE protein.
  
 
   0.965
RMCT_3877
Rieske iron-sulfur protein qcrA.
  
 
   0.960
RMCT_1781
Hypothetical protein.
  
 
   0.959
CtaC
Transmembrane cytochrome C oxidase subunit II ctaC.
  
 
   0.954
QcrB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
   0.948
QcrC
Ubiquinol-cytochrome C reductase qcrC.
    
   0.948
CtaF
Integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.939
RMCT_0900
Putative uncharacterized protein.
    
   0.889
SodC_1
Periplasmic superoxide dismutase [Cu-Zn] sodC; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
   0.889
CtaE_1
Cytochrome c oxidase subunit III.
    
   0.889
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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