STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4297Hypothetical protein. (187 aa)    
Predicted Functional Partners:
RMCT_4296
Hypothetical protein.
       0.883
RMCT_1150
Protein of unknown function.
  
     0.648
EchA8_13
enoyl-CoA hydratase.
       0.642
RMCT_2009
Putative uncharacterized protein.
  
     0.571
RMCT_2344
MmpS3 protein.
  
     0.473
CwlH
Peptidoglycan binding domain-containing protein.
  
     0.435
TetR_2
TetR family transcriptional regulator.
  
     0.434
RMCT_3327
Lipoprotein lpqF.
  
     0.414
RMCT_3905
FHA domain-containing protein.
  
     0.412
MsrR_2
Cell envelope-related transcriptional attenuator.
  
     0.409
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.