STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4317Flavodoxin-like protein. (151 aa)    
Predicted Functional Partners:
RMCT_4316
Transmembrane protein.
 
     0.897
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.891
RMCT_4314
Uncharacterized protein.
       0.762
Ald
Secreted L-alanine dehydrogenase ald; Belongs to the AlaDH/PNT family.
       0.642
RMCT_4318
Putative uncharacterized protein.
       0.602
RMCT_0834
Transglycosylase.
 
  
 0.572
ActIII
Short-chain alcohol dehydrogenase.
  
  
 0.571
RMCT_1870
Uncharacterized protein, precursor.
 
  
 0.529
RMCT_1107
Putative uncharacterized protein.
  
  
 0.504
RMCT_1665
Integral membrane protein.
   
  
 0.504
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.