Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4317Flavodoxin-like protein. (151 aa)    
Predicted Functional Partners:
RMCT_4316
Transmembrane protein.
 
     0.883
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.875
RMCT_4314
Uncharacterized protein.
       0.762
Ald
Secreted L-alanine dehydrogenase ald; Belongs to the AlaDH/PNT family.
       0.629
RMCT_0834
Transglycosylase.
 
  
 0.605
RMCT_4318
Putative uncharacterized protein.
       0.601
RMCT_1870
Uncharacterized protein, precursor.
 
  
 0.539
Dps
Ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.538
Dps2
DNA-binding ferritin-like protein; Belongs to the Dps family.
  
  
 0.538
ActIII
Short-chain alcohol dehydrogenase.
  
  
 0.533
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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