STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4341Putative uncharacterized protein. (254 aa)    
Predicted Functional Partners:
RMCT_2837
RNA polymerase sigma-70 factor.
  
    0.785
RMCT_1427
Putative uncharacterized protein.
  
     0.771
RMCT_2341
Conserved protein of unknown function.
 
    0.770
RMCT_0937
Hypothetical protein.
 
     0.769
RMCT_0899
Protein of unknown function.
 
    0.765
RMCT_2848
DivIVA domain-containing protein.
  
     0.755
Cfp6
Low molecular weight protein antigen 6 cfp6.
  
     0.753
RMCT_3930
Lipoprotein lppL.
 
     0.746
RMCT_3430
Hypothetical protein.
  
     0.743
RMCT_0688
Secreted alanine rich protein.
  
     0.738
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.