Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4345Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (144 aa)    
Predicted Functional Partners:
RMCT_4346
Short-chain type dehydrogenase.
  
    0.778
CobK
Cobalt-precorrin-6x reductase.
 
     0.763
CobL
Precorrin-6y methyltransferase cobL.
       0.728
CobM
Precorrin-4 c11-methyltransferase cobM; Belongs to the precorrin methyltransferase family.
       0.728
Fgd1_6
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase.
 
   
 0.545
RMCT_1504
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
 
    0.533
RMCT_4399
Hypothetical protein.
  
   
 0.474
Dps
Ferritin, Dps family protein; Belongs to the Dps family.
 
  
 0.468
BetC
Hydrolase.
  
  
 0.464
RMCT_0225
Putative uncharacterized protein.
  
    0.448
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.