STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_4346Short-chain type dehydrogenase. (248 aa)    
Predicted Functional Partners:
CobL
Precorrin-6y methyltransferase cobL.
  
    0.939
CobM
Precorrin-4 c11-methyltransferase cobM; Belongs to the precorrin methyltransferase family.
       0.860
CobK
Cobalt-precorrin-6x reductase.
       0.860
RMCT_4661
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.811
DprE1_2
Oxidoreductase.
 
  
 0.810
RMCT_4345
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
    0.804
RMCT_0002
Integral membrane protein.
 
     0.758
RMCT_4660
Transmembrane protein.
 
   
 0.517
EmbC_2
Integral membrane indolylacetylinositol arabinosyltransferase embB.
 
   
 0.499
EmbC_1
Integral membrane indolylacetylinositol arabinosyltransferase embC.
 
   
 0.498
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.