STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EthR_4Transcriptional regulatory repressor protein (TetR-family) EthR. (232 aa)    
Predicted Functional Partners:
RMCT_4350
Aminoglycoside phosphotransferase.
       0.744
CobH
precorrin-8X methylmutase.
     
 0.575
RMCT_4354
Cobalamin biosynthesis protein cobG.
     
 0.569
CobI_1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Bifunctional protein, cobI-cobJ fusion protein: S-adenosyl-L-methionine-precorrin-2 methyl transferase + precorrin-3 methylase; Belongs to the precorrin methyltransferase family.
  
    0.553
RMCT_1568
TetR family transcriptional regulator.
 
    0.500
YccS
Putative uncharacterized protein.
 
    0.478
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
  
 0.461
CysL
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
 
 0.455
RMCT_3695
Putative uncharacterized protein.
  
     0.438
GerE
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
  
 0.429
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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