Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RipANLP/P60 protein. (486 aa)    
Predicted Functional Partners:
RMCT_2116
Protein of unknown function.
  
 
 0.959
FtsX
Cell division protein ftsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.918
RipB_1
NLP/P60 protein.
 
  
0.853
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.822
RMCT_3075
Conserved alanine and proline rich protein.
 
  
 0.802
LytC
Hydrolase.
 
  
 0.791
RMCT_1502
Putative uncharacterized protein.
  
 
 0.784
RipB_2
Cell wall-associated hydrolase, invasion-associated protein.
  
  
 0.724
FtsW_2
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.719
RMCT_1136
Secreted proline rich protein Mtc28.
   
  
 0.710
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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