STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RipANLP/P60 protein. (486 aa)    
Predicted Functional Partners:
RMCT_1545
Transglycosylase domain-containing protein.
 
  
 0.882
RipB_1
NLP/P60 protein.
 
  
0.863
LytC
Hydrolase.
 
  
 0.809
RMCT_3075
Conserved alanine and proline rich protein.
 
  
 0.787
RipB_2
Cell wall-associated hydrolase, invasion-associated protein.
 
  
0.763
RMCT_1502
Putative uncharacterized protein.
  
  
 0.746
FtsW_2
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.736
RMCT_0052
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.721
RMCT_1136
Secreted proline rich protein Mtc28.
   
  
 0.701
SigE
ECF subfamily RNA polymerase sigma-24 subunit; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.685
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.