Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NirDNitrite reductase small subunit. (56 aa)    
Predicted Functional Partners:
NarY
Respiratory nitrate reductase beta subunit narH.
  
 
 0.968
NarG
Respiratory nitrate reductase subunit alpha narG; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.964
NarX_1
Nitrate reductase narX.
  
 
 0.960
NarK2
Nitrate/nitrite transporter narK2.
 
 
 0.942
GlnA_1
Glutamine synthetase.
  
 
 0.930
GlnA_2
Glutamine synthetase glnA1.
  
 
 0.930
RMCT_4397
Possible transcriptional regulatory protein.
 
  
 0.923
RMCT_1988
Oxidoreductase.
    
 0.908
GdhA
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.906
GdhB_2
NAD-dependent glutamate dehydrogenase gdh.
     
 0.905
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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