Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AnsA | AsnB_1 | RMCT_4388 | RMCT_4272 | L-aparaginase ansA. | Asparagine synthase, glutamine-hydrolyzing. | 0.911 |
AnsA | AsnB_2 | RMCT_4388 | RMCT_3866 | L-aparaginase ansA. | Asparagine synthetase asnB. | 0.911 |
AnsA | NadB | RMCT_4388 | RMCT_4418 | L-aparaginase ansA. | L-aspartate oxidase nadB; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.922 |
AnsA | argG | RMCT_4388 | RMCT_4501 | L-aparaginase ansA. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.920 |
AnsA | panD | RMCT_4388 | RMCT_3318 | L-aparaginase ansA. | Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.856 |
AnsA | purA | RMCT_4388 | RMCT_2756 | L-aparaginase ansA. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
AnsA | pyrB | RMCT_4388 | RMCT_3662 | L-aparaginase ansA. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.912 |
AsnB_1 | AnsA | RMCT_4272 | RMCT_4388 | Asparagine synthase, glutamine-hydrolyzing. | L-aparaginase ansA. | 0.911 |
AsnB_1 | AsnB_2 | RMCT_4272 | RMCT_3866 | Asparagine synthase, glutamine-hydrolyzing. | Asparagine synthetase asnB. | 0.925 |
AsnB_1 | NadB | RMCT_4272 | RMCT_4418 | Asparagine synthase, glutamine-hydrolyzing. | L-aspartate oxidase nadB; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.906 |
AsnB_1 | argG | RMCT_4272 | RMCT_4501 | Asparagine synthase, glutamine-hydrolyzing. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.931 |
AsnB_1 | panD | RMCT_4272 | RMCT_3318 | Asparagine synthase, glutamine-hydrolyzing. | Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.805 |
AsnB_1 | purA | RMCT_4272 | RMCT_2756 | Asparagine synthase, glutamine-hydrolyzing. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.922 |
AsnB_1 | pyrB | RMCT_4272 | RMCT_3662 | Asparagine synthase, glutamine-hydrolyzing. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.920 |
AsnB_2 | AnsA | RMCT_3866 | RMCT_4388 | Asparagine synthetase asnB. | L-aparaginase ansA. | 0.911 |
AsnB_2 | AsnB_1 | RMCT_3866 | RMCT_4272 | Asparagine synthetase asnB. | Asparagine synthase, glutamine-hydrolyzing. | 0.925 |
AsnB_2 | NadB | RMCT_3866 | RMCT_4418 | Asparagine synthetase asnB. | L-aspartate oxidase nadB; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.906 |
AsnB_2 | argG | RMCT_3866 | RMCT_4501 | Asparagine synthetase asnB. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.931 |
AsnB_2 | panD | RMCT_3866 | RMCT_3318 | Asparagine synthetase asnB. | Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.805 |
AsnB_2 | purA | RMCT_3866 | RMCT_2756 | Asparagine synthetase asnB. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.922 |
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