Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_4440Putative uncharacterized protein. (171 aa)    
Predicted Functional Partners:
CydC
Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC.
       0.773
CydD
Transmembrane ATP-binding protein ABC transporter cydD.
       0.773
CydB
Integral membrane cytochrome D ubiquinol oxidase subunit II cydB.
     
 0.698
AppC
Integral membrane cytochrome D ubiquinol oxidase subunit I cydA.
       0.657
RMCT_0316
Carboxymuconolactone decarboxylase.
 
   
 0.541
RMCT_0152
Putative uncharacterized protein.
 
     0.524
DevR_1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  
 0.518
RMCT_4445
Conserved membrane protein.
       0.469
KstR_5
TetR family transcriptional regulator.
 
  
 0.446
KstR_1
TetR family transcriptional regulator.
 
  
 0.420
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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