Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_4445Conserved membrane protein. (196 aa)    
Predicted Functional Partners:
RMCT_1454
Hypothetical protein.
  
  
 0.761
AppC
Integral membrane cytochrome D ubiquinol oxidase subunit I cydA.
  
  
 0.694
CydD
Transmembrane ATP-binding protein ABC transporter cydD.
       0.672
RMCT_4446
Histidine kinase.
 
     0.640
NarL
Two-component system response regulator.
 
     0.630
CydB
Integral membrane cytochrome D ubiquinol oxidase subunit II cydB.
  
    0.624
GadA
Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family.
 
  
 0.596
CydC
Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC.
       0.591
Cya_1
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
     
 0.506
RMCT_1407
Hypothetical protein.
  
     0.500
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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